Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps4aQ8VEJ9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Gm18041-201ENSMUST00000218210 618 ntBASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps4aQ8VEJ9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Mir698-201ENSMUST00000102164 109 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm17150-201ENSMUST00000165577 381 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm9002-201ENSMUST00000178437 499 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Mir6392-201ENSMUST00000184924 108 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm28760-201ENSMUST00000185995 736 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 AY702102-202ENSMUST00000194651 1173 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 AC155286.1-201ENSMUST00000218632 448 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Mir497b-201ENSMUST00000093601 125 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm42748-201ENSMUST00000199354 2341 ntBASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps4aQ8VEJ9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps4aQ8VEJ9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms