Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp7Q8R1T1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm14381-201ENSMUST00000122105 414 ntBASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm27320-201ENSMUST00000184892 109 ntBASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm37042-201ENSMUST00000193816 581 ntBASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm18584-201ENSMUST00000203098 964 ntBASIC17■□□□□ 0.31
Chmp7Q8R1T1 Gm5781-201ENSMUST00000219792 443 ntBASIC17■□□□□ 0.31
Chmp7Q8R1T1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chmp7Q8R1T1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Gm15808-201ENSMUST00000119046 604 ntBASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Gm11978-201ENSMUST00000122315 466 ntBASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp7Q8R1T1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Mir877-201ENSMUST00000104738 85 ntBASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chmp7Q8R1T1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Gm24255-201ENSMUST00000104481 128 ntBASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Gm17208-201ENSMUST00000168388 535 ntBASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp7Q8R1T1 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms