Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.51■□□□□ 0.23
Smc5Q8CG46 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.51■□□□□ 0.23
Smc5Q8CG46 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smc5Q8CG46 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Gm15376-201ENSMUST00000122258 783 ntBASIC16.5■□□□□ 0.23
Smc5Q8CG46 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Gm43094-201ENSMUST00000196549 921 ntBASIC16.5■□□□□ 0.23
Smc5Q8CG46 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Smc5Q8CG46 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smc5Q8CG46 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gm21854-201ENSMUST00000179901 471 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gm29608-201ENSMUST00000190444 463 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gm38144-201ENSMUST00000192790 465 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Gm19931-201ENSMUST00000198920 368 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.49■□□□□ 0.23
Smc5Q8CG46 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smc5Q8CG46 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm14701-201ENSMUST00000117156 348 ntBASIC16.48■□□□□ 0.23
Smc5Q8CG46 Gm12485-201ENSMUST00000119641 291 ntBASIC16.48■□□□□ 0.23
Smc5Q8CG46 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms