Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trub1Q8C0D0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trub1Q8C0D0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm5866-201ENSMUST00000177881 973 ntBASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Mir6392-201ENSMUST00000184924 108 ntBASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trub1Q8C0D0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.76□□□□□ -0.21
Trub1Q8C0D0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.76□□□□□ -0.21
Trub1Q8C0D0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms