Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm9824-201ENSMUST00000178707 561 ntBASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm17837-201ENSMUST00000186435 985 ntBASIC11.8□□□□□ -0.52
SprnQ8BWU1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.8□□□□□ -0.52
SprnQ8BWU1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.8□□□□□ -0.52
SprnQ8BWU1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SprnQ8BWU1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm5566-201ENSMUST00000116118 459 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm15693-201ENSMUST00000120470 637 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm13385-201ENSMUST00000121089 220 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm29541-201ENSMUST00000191351 678 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.79□□□□□ -0.52
SprnQ8BWU1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SprnQ8BWU1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Matn2-203ENSMUST00000226766 3252 ntBASIC11.78□□□□□ -0.52
SprnQ8BWU1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SprnQ8BWU1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms