Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm22323-201ENSMUST00000103832 109 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm24548-201ENSMUST00000158650 108 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm37259-201ENSMUST00000193903 849 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm38158-201ENSMUST00000194617 339 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Gm21769-201ENSMUST00000211922 111 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.19□□□□□ -0.14
Smarcal1Q8BJL0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm26185-201ENSMUST00000157692 266 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm26083-201ENSMUST00000157904 193 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm10608-202ENSMUST00000213924 676 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm5781-201ENSMUST00000219792 443 ntBASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Smarcal1Q8BJL0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm24255-201ENSMUST00000104481 128 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm4986-201ENSMUST00000119731 549 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm7809-201ENSMUST00000153199 742 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm27320-201ENSMUST00000184892 109 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms