Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm15371-201ENSMUST00000117057 784 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm29649-201ENSMUST00000185649 419 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm29127-201ENSMUST00000188304 517 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.78□□□□□ -0.36
SynbQ8BI41 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.78□□□□□ -0.36
SynbQ8BI41 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynbQ8BI41 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
SynbQ8BI41 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SynbQ8BI41 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.77□□□□□ -0.36
SynbQ8BI41 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynbQ8BI41 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SynbQ8BI41 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.77□□□□□ -0.37
SynbQ8BI41 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm15376-201ENSMUST00000122258 783 ntBASIC12.77□□□□□ -0.37
SynbQ8BI41 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm6983-201ENSMUST00000214912 628 ntBASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.77□□□□□ -0.37
SynbQ8BI41 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.77□□□□□ -0.37
SynbQ8BI41 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.77□□□□□ -0.37
SynbQ8BI41 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.77□□□□□ -0.37
SynbQ8BI41 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SynbQ8BI41 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SynbQ8BI41 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SynbQ8BI41 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SynbQ8BI41 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm24196-201ENSMUST00000179161 110 ntBASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm8927-201ENSMUST00000181978 981 ntBASIC12.76□□□□□ -0.37
SynbQ8BI41 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms