Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Gm6447-201ENSMUST00000118905 835 ntBASIC13.8□□□□□ -0.2
Trim62Q80V85 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.8□□□□□ -0.2
Trim62Q80V85 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.8□□□□□ -0.2
Trim62Q80V85 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim62Q80V85 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim62Q80V85 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm10156-201ENSMUST00000122364 462 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm24196-201ENSMUST00000179161 110 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim62Q80V85 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.79□□□□□ -0.2
Trim62Q80V85 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim62Q80V85 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim62Q80V85 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.78□□□□□ -0.2
Trim62Q80V85 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Gm4984-201ENSMUST00000115987 360 ntBASIC13.78□□□□□ -0.2
Trim62Q80V85 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim62Q80V85 Gm27839-201ENSMUST00000184242 106 ntBASIC13.78□□□□□ -0.2
Trim62Q80V85 Gm44069-201ENSMUST00000204898 506 ntBASIC13.78□□□□□ -0.2
Trim62Q80V85 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim62Q80V85 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms