Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Gm24158-201ENSMUST00000175263 71 ntBASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Gm5264-201ENSMUST00000190584 848 ntBASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm27533-201ENSMUST00000183800 152 ntBASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm46209-201ENSMUST00000217912 553 ntBASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scaf4Q6PFF0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm6415-201ENSMUST00000118488 348 ntBASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm5425-201ENSMUST00000214125 459 ntBASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm5779-201ENSMUST00000218467 910 ntBASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scaf4Q6PFF0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scaf4Q6PFF0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scaf4Q6PFF0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Scaf4Q6PFF0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.14□□□□□ -0.31
Scaf4Q6PFF0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms