Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm12380-201ENSMUST00000119012 544 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm13408-201ENSMUST00000119822 798 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm14832-201ENSMUST00000121289 322 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm13935-201ENSMUST00000121859 798 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm9061-201ENSMUST00000182707 1006 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 AC154222.2-201ENSMUST00000225848 607 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm43416-201ENSMUST00000201916 1015 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm44651-201ENSMUST00000207343 372 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Gm5369-201ENSMUST00000217499 588 ntBASIC20.17■□□□□ 0.82
Slx4Q6P1D7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Gm6963-201ENSMUST00000147879 379 ntBASIC20.16■□□□□ 0.82
Slx4Q6P1D7 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Slx4Q6P1D7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Sybu-209ENSMUST00000228639 4113 ntBASIC20.15■□□□□ 0.82
Slx4Q6P1D7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Gm10752-201ENSMUST00000218348 729 ntBASIC20.15■□□□□ 0.82
Slx4Q6P1D7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slx4Q6P1D7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slx4Q6P1D7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Selenot-ps-201ENSMUST00000119098 593 ntBASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Gm8018-201ENSMUST00000173536 789 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms