Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm12341-201ENSMUST00000119724 503 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm27772-201ENSMUST00000184900 187 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm43094-201ENSMUST00000196549 921 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm9794-201ENSMUST00000202370 423 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.04□□□□□ -0.32
Vsx2Q61412 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vsx2Q61412 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx2Q61412 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.03□□□□□ -0.32
Vsx2Q61412 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.03□□□□□ -0.32
Vsx2Q61412 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.03□□□□□ -0.32
Vsx2Q61412 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.03□□□□□ -0.32
Vsx2Q61412 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.03□□□□□ -0.32
Vsx2Q61412 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.03□□□□□ -0.32
Vsx2Q61412 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.03□□□□□ -0.32
Vsx2Q61412 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx2Q61412 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vsx2Q61412 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx2Q61412 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.02□□□□□ -0.32
Vsx2Q61412 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.02□□□□□ -0.32
Vsx2Q61412 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.02□□□□□ -0.33
Vsx2Q61412 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.02□□□□□ -0.33
Vsx2Q61412 Gm9908-201ENSMUST00000211534 448 ntBASIC13.02□□□□□ -0.33
Vsx2Q61412 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.02□□□□□ -0.33
Vsx2Q61412 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.02□□□□□ -0.33
Vsx2Q61412 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.02□□□□□ -0.33
Vsx2Q61412 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vsx2Q61412 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms