Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm5566-201ENSMUST00000116118 459 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mir7221-201ENSMUST00000184009 72 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Paupar-201ENSMUST00000194826 3482 ntBASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm1401-201ENSMUST00000122048 772 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm6916-202ENSMUST00000205523 195 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pck2-205ENSMUST00000226352 2784 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms