Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Prpf38aQ4FK66 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Gm19184-201ENSMUST00000196798 928 ntBASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Gm18054-201ENSMUST00000207539 555 ntBASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Gm45331-201ENSMUST00000209868 554 ntBASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Prpf38aQ4FK66 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Prpf38aQ4FK66 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38aQ4FK66 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38aQ4FK66 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prpf38aQ4FK66 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms