Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc27Q3V036 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm15393-201ENSMUST00000120499 219 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Gm38294-201ENSMUST00000192831 381 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc27Q3V036 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Gm4804-201ENSMUST00000182234 999 ntBASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Gm44344-201ENSMUST00000200287 129 ntBASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Gm6888-201ENSMUST00000221983 706 ntBASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc27Q3V036 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc27Q3V036 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Gm12585-201ENSMUST00000117307 290 ntBASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Gm14767-201ENSMUST00000121559 586 ntBASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc27Q3V036 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.01■□□□□ 0.31
Ccdc27Q3V036 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms