Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm13689-201ENSMUST00000119360 685 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm12485-201ENSMUST00000119641 291 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm26464-201ENSMUST00000157094 305 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm8652-201ENSMUST00000181363 964 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm27772-201ENSMUST00000184900 187 ntBASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Khdc4Q3TCX3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Khdc4Q3TCX3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Khdc4Q3TCX3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Khdc4Q3TCX3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms