Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm27501-201ENSMUST00000183599 107 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm28693-202ENSMUST00000190758 331 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.44□□□□□ -0.1
Col9a2Q07643 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.44□□□□□ -0.1
Col9a2Q07643 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col9a2Q07643 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.43□□□□□ -0.1
Col9a2Q07643 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.43□□□□□ -0.1
Col9a2Q07643 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.43□□□□□ -0.1
Col9a2Q07643 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.43□□□□□ -0.1
Col9a2Q07643 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col9a2Q07643 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col9a2Q07643 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a2Q07643 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Gm43133-201ENSMUST00000197472 463 ntBASIC14.42□□□□□ -0.1
Col9a2Q07643 Gm43179-201ENSMUST00000198797 275 ntBASIC14.42□□□□□ -0.1
Col9a2Q07643 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.42□□□□□ -0.1
Col9a2Q07643 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms