Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx4Q07424 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Mir698-201ENSMUST00000102164 109 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm24420-201ENSMUST00000176676 59 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm45384-201ENSMUST00000210451 277 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdx4Q07424 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdx4Q07424 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.34□□□□□ -0.75
Cdx4Q07424 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.34□□□□□ -0.75
Cdx4Q07424 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx4Q07424 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Cdx4Q07424 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm6912-201ENSMUST00000117218 544 ntBASIC10.33□□□□□ -0.76
Cdx4Q07424 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Mir6392-201ENSMUST00000184924 108 ntBASIC10.33□□□□□ -0.76
Cdx4Q07424 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm6180-201ENSMUST00000065243 498 ntBASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.33□□□□□ -0.76
Cdx4Q07424 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cdx4Q07424 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Cdx4Q07424 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms