Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sox4Q06831 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox4Q06831 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox4Q06831 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.13□□□□□ -0.31
Sox4Q06831 Gm8652-201ENSMUST00000181363 964 ntBASIC13.13□□□□□ -0.31
Sox4Q06831 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.13□□□□□ -0.31
Sox4Q06831 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox4Q06831 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox4Q06831 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox4Q06831 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Sox4Q06831 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Sox4Q06831 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox4Q06831 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox4Q06831 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Sox4Q06831 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm27486-201ENSMUST00000184923 80 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm8598-201ENSMUST00000221184 836 ntBASIC13.12□□□□□ -0.31
Sox4Q06831 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox4Q06831 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Sox4Q06831 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox4Q06831 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.11□□□□□ -0.31
Sox4Q06831 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox4Q06831 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm6447-201ENSMUST00000118905 835 ntBASIC13.11□□□□□ -0.31
Sox4Q06831 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox4Q06831 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm18187-201ENSMUST00000196476 984 ntBASIC13.11□□□□□ -0.31
Sox4Q06831 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.11□□□□□ -0.31
Sox4Q06831 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox4Q06831 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sox4Q06831 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Sox4Q06831 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox4Q06831 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox4Q06831 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms