Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gm4875-201ENSMUST00000118257 786 ntBASIC13.61□□□□□ -0.23
Thumpd3P97770 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.61□□□□□ -0.23
Thumpd3P97770 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Thumpd3P97770 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gm44719-201ENSMUST00000206404 149 ntBASIC13.61□□□□□ -0.23
Thumpd3P97770 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Thumpd3P97770 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm3436-201ENSMUST00000179930 840 ntBASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm24694-201ENSMUST00000180054 110 ntBASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm27663-201ENSMUST00000184839 110 ntBASIC13.6□□□□□ -0.23
Thumpd3P97770 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.6□□□□□ -0.23
Thumpd3P97770 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.6□□□□□ -0.23
Thumpd3P97770 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thumpd3P97770 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Thumpd3P97770 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Thumpd3P97770 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Thumpd3P97770 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm15321-201ENSMUST00000121290 288 ntBASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.59□□□□□ -0.23
Thumpd3P97770 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.59□□□□□ -0.23
Thumpd3P97770 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm29667-201ENSMUST00000190817 490 ntBASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm6218-201ENSMUST00000219812 628 ntBASIC13.59□□□□□ -0.23
Thumpd3P97770 Mir497b-201ENSMUST00000093601 125 ntBASIC13.59□□□□□ -0.23
Thumpd3P97770 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.59□□□□□ -0.23
Thumpd3P97770 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Thumpd3P97770 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms