Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC21.4■■□□□ 1.02
Cux2P70298 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cux2P70298 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cux2P70298 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Cux2P70298 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC21.4■■□□□ 1.02
Cux2P70298 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC21.39■■□□□ 1.02
Cux2P70298 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Gm7851-201ENSMUST00000117574 323 ntBASIC21.39■■□□□ 1.02
Cux2P70298 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Rmrp-201ENSMUST00000157463 271 ntBASIC21.39■■□□□ 1.02
Cux2P70298 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC21.39■■□□□ 1.02
Cux2P70298 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC21.39■■□□□ 1.02
Cux2P70298 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC21.39■■□□□ 1.02
Cux2P70298 AC125209.1-201ENSMUST00000225812 766 ntBASIC21.39■■□□□ 1.02
Cux2P70298 AL732506.1-201ENSMUST00000226420 281 ntBASIC21.39■■□□□ 1.02
Cux2P70298 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Mir219a-1-201ENSMUST00000083621 110 ntBASIC21.39■■□□□ 1.02
Cux2P70298 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Cux2P70298 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cux2P70298 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Cux2P70298 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cux2P70298 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC21.38■■□□□ 1.01
Cux2P70298 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Rn7s6-201ENSMUST00000175005 291 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
Cux2P70298 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Cux2P70298 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC21.38■■□□□ 1.01
Cux2P70298 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cux2P70298 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cux2P70298 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cux2P70298 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cux2P70298 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC21.38■■□□□ 1.01
Cux2P70298 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC21.38■■□□□ 1.01
Cux2P70298 Gm28071-201ENSMUST00000190355 478 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Gm4797-201ENSMUST00000219075 1283 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cux2P70298 Gm6781-201ENSMUST00000038304 1242 ntBASIC21.38■■□□□ 1.01
Cux2P70298 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.38■■□□□ 1.01
Cux2P70298 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC21.37■■□□□ 1.01
Cux2P70298 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC21.37■■□□□ 1.01
Cux2P70298 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC21.37■■□□□ 1.01
Cux2P70298 Gm1821-202ENSMUST00000227415 750 ntBASIC21.37■■□□□ 1.01
Cux2P70298 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cux2P70298 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC21.37■■□□□ 1.01
Cux2P70298 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cux2P70298 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms