Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm3P62311 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm3P62311 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lsm3P62311 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.13□□□□□ -0.47
Lsm3P62311 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Lsm3P62311 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Gm10252-201ENSMUST00000209541 832 ntBASIC12.13□□□□□ -0.47
Lsm3P62311 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm3P62311 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lsm3P62311 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm3P62311 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm3P62311 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.12□□□□□ -0.47
Lsm3P62311 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm3P62311 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm3P62311 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm3P62311 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Gm9385-201ENSMUST00000117563 472 ntBASIC12.12□□□□□ -0.47
Lsm3P62311 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm3P62311 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Gm27301-201ENSMUST00000184012 127 ntBASIC12.12□□□□□ -0.47
Lsm3P62311 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm3P62311 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm3P62311 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Lsm3P62311 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm3P62311 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm3P62311 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm3P62311 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms