Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm27437-201ENSMUST00000183429 107 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm43703-201ENSMUST00000200523 763 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.79□□□□□ -0.52
Sec61a1P61620 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm2423-201ENSMUST00000074863 733 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.79□□□□□ -0.52
Sec61a1P61620 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sec61a1P61620 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Sec61a1P61620 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sec61a1P61620 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Gm4875-201ENSMUST00000118257 786 ntBASIC11.78□□□□□ -0.52
Sec61a1P61620 Gm14719-201ENSMUST00000121891 340 ntBASIC11.78□□□□□ -0.52
Sec61a1P61620 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.78□□□□□ -0.52
Sec61a1P61620 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.78□□□□□ -0.52
Sec61a1P61620 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sec61a1P61620 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sec61a1P61620 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.78□□□□□ -0.52
Sec61a1P61620 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Sec61a1P61620 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.77□□□□□ -0.52
Sec61a1P61620 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.77□□□□□ -0.52
Sec61a1P61620 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sec61a1P61620 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sec61a1P61620 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.77□□□□□ -0.53
Sec61a1P61620 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Gm15653-201ENSMUST00000119247 907 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Gm12882-201ENSMUST00000121696 517 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sec61a1P61620 Gm16215-201ENSMUST00000161990 637 ntBASIC11.77□□□□□ -0.53
Sec61a1P61620 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms