Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cdh5P55284 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cdh5P55284 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh5P55284 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cdh5P55284 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.04□□□□□ -0.32
Cdh5P55284 Gm24694-201ENSMUST00000180054 110 ntBASIC13.04□□□□□ -0.32
Cdh5P55284 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Gm9522-201ENSMUST00000182394 926 ntBASIC13.04□□□□□ -0.32
Cdh5P55284 Gm27663-201ENSMUST00000184839 110 ntBASIC13.04□□□□□ -0.32
Cdh5P55284 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.04□□□□□ -0.32
Cdh5P55284 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.04□□□□□ -0.32
Cdh5P55284 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh5P55284 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdh5P55284 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdh5P55284 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Cdh5P55284 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdh5P55284 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.03□□□□□ -0.32
Cdh5P55284 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Cdh5P55284 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdh5P55284 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdh5P55284 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh5P55284 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh5P55284 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Cdh5P55284 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh5P55284 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh5P55284 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdh5P55284 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.02□□□□□ -0.32
Cdh5P55284 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Gm7488-201ENSMUST00000117148 684 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 Gm15460-201ENSMUST00000118147 391 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 Gm15957-201ENSMUST00000118893 974 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cdh5P55284 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdh5P55284 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdh5P55284 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh5P55284 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh5P55284 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.02□□□□□ -0.33
Cdh5P55284 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdh5P55284 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdh5P55284 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdh5P55284 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms