Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.4□□□□□ -0.1
Nub1P54729 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.4□□□□□ -0.1
Nub1P54729 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Nub1P54729 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nub1P54729 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nub1P54729 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.4□□□□□ -0.1
Nub1P54729 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nub1P54729 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nub1P54729 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Nub1P54729 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.39□□□□□ -0.11
Nub1P54729 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.39□□□□□ -0.11
Nub1P54729 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nub1P54729 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.39□□□□□ -0.11
Nub1P54729 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nub1P54729 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.38□□□□□ -0.11
Nub1P54729 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Nub1P54729 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.38□□□□□ -0.11
Nub1P54729 Gm42550-201ENSMUST00000201553 960 ntBASIC14.38□□□□□ -0.11
Nub1P54729 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.38□□□□□ -0.11
Nub1P54729 Gm9908-201ENSMUST00000211534 448 ntBASIC14.38□□□□□ -0.11
Nub1P54729 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.38□□□□□ -0.11
Nub1P54729 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.38□□□□□ -0.11
Nub1P54729 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nub1P54729 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.38□□□□□ -0.11
Nub1P54729 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nub1P54729 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nub1P54729 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Nub1P54729 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.38□□□□□ -0.11
Nub1P54729 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nub1P54729 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Nub1P54729 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nub1P54729 Gm11434-201ENSMUST00000122379 629 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nub1P54729 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.37□□□□□ -0.11
Nub1P54729 Gm38144-201ENSMUST00000192790 465 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Gm38223-201ENSMUST00000194484 695 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Gm8515-201ENSMUST00000194852 576 ntBASIC14.37□□□□□ -0.11
Nub1P54729 Gm6745-201ENSMUST00000199216 526 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms