Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.12□□□□□ -0.15
Shmt1P50431 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Shmt1P50431 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Shmt1P50431 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.12□□□□□ -0.15
Shmt1P50431 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Shmt1P50431 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.11□□□□□ -0.15
Shmt1P50431 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Gm22331-201ENSMUST00000158066 136 ntBASIC14.11□□□□□ -0.15
Shmt1P50431 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.11□□□□□ -0.15
Shmt1P50431 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Shmt1P50431 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.11□□□□□ -0.15
Shmt1P50431 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Shmt1P50431 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.1□□□□□ -0.15
Shmt1P50431 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Shmt1P50431 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Shmt1P50431 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.1□□□□□ -0.15
Shmt1P50431 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.1□□□□□ -0.15
Shmt1P50431 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm29127-201ENSMUST00000188304 517 ntBASIC14.1□□□□□ -0.15
Shmt1P50431 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.1□□□□□ -0.15
Shmt1P50431 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.1□□□□□ -0.15
Shmt1P50431 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.1□□□□□ -0.15
Shmt1P50431 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Shmt1P50431 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Shmt1P50431 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.1□□□□□ -0.15
Shmt1P50431 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.1□□□□□ -0.15
Shmt1P50431 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.1□□□□□ -0.15
Shmt1P50431 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Shmt1P50431 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms