Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SftpbP50405 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SftpbP50405 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SftpbP50405 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SftpbP50405 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SftpbP50405 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.69□□□□□ -0.22
SftpbP50405 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SftpbP50405 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SftpbP50405 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.68□□□□□ -0.22
SftpbP50405 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
SftpbP50405 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SftpbP50405 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.68□□□□□ -0.22
SftpbP50405 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SftpbP50405 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SftpbP50405 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SftpbP50405 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SftpbP50405 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SftpbP50405 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.67□□□□□ -0.22
SftpbP50405 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.67□□□□□ -0.22
SftpbP50405 Gm27680-201ENSMUST00000184192 160 ntBASIC13.67□□□□□ -0.22
SftpbP50405 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SftpbP50405 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.67□□□□□ -0.22
SftpbP50405 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SftpbP50405 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.67□□□□□ -0.22
SftpbP50405 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SftpbP50405 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.67□□□□□ -0.22
SftpbP50405 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.66□□□□□ -0.22
SftpbP50405 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.66□□□□□ -0.22
SftpbP50405 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.66□□□□□ -0.22
SftpbP50405 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SftpbP50405 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SftpbP50405 Gm27321-201ENSMUST00000185021 205 ntBASIC13.66□□□□□ -0.22
SftpbP50405 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.66□□□□□ -0.22
SftpbP50405 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.66□□□□□ -0.22
SftpbP50405 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SftpbP50405 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.66□□□□□ -0.22
SftpbP50405 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SftpbP50405 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms