Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ercc3P49135 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.85■□□□□ 0.13
Ercc3P49135 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ercc3P49135 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.85■□□□□ 0.13
Ercc3P49135 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ercc3P49135 Gm44719-201ENSMUST00000206404 149 ntBASIC15.85■□□□□ 0.13
Ercc3P49135 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ercc3P49135 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.85■□□□□ 0.13
Ercc3P49135 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.85■□□□□ 0.13
Ercc3P49135 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ercc3P49135 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ercc3P49135 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ercc3P49135 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.84■□□□□ 0.13
Ercc3P49135 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ercc3P49135 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.84■□□□□ 0.13
Ercc3P49135 Gm43438-201ENSMUST00000198133 379 ntBASIC15.84■□□□□ 0.13
Ercc3P49135 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.84■□□□□ 0.13
Ercc3P49135 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.84■□□□□ 0.13
Ercc3P49135 Gm26315-201ENSMUST00000083890 321 ntBASIC15.84■□□□□ 0.13
Ercc3P49135 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Ercc3P49135 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ercc3P49135 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ercc3P49135 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ercc3P49135 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ercc3P49135 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Ercc3P49135 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ercc3P49135 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ercc3P49135 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.83■□□□□ 0.12
Ercc3P49135 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.83■□□□□ 0.12
Ercc3P49135 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.83■□□□□ 0.12
Ercc3P49135 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.83■□□□□ 0.12
Ercc3P49135 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.83■□□□□ 0.12
Ercc3P49135 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ercc3P49135 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.83■□□□□ 0.12
Ercc3P49135 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ercc3P49135 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ercc3P49135 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ercc3P49135 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ercc3P49135 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ercc3P49135 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ercc3P49135 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ercc3P49135 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ercc3P49135 Gm11478-201ENSMUST00000117851 599 ntBASIC15.82■□□□□ 0.12
Ercc3P49135 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.82■□□□□ 0.12
Ercc3P49135 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms