Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf9P41274 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfsf9P41274 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Tnfsf9P41274 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.78□□□□□ -0.36
Tnfsf9P41274 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.78□□□□□ -0.36
Tnfsf9P41274 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfsf9P41274 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.77□□□□□ -0.36
Tnfsf9P41274 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf9P41274 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfsf9P41274 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Gm14660-201ENSMUST00000119809 575 ntBASIC12.77□□□□□ -0.37
Tnfsf9P41274 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Snora78-201ENSMUST00000158630 128 ntBASIC12.77□□□□□ -0.37
Tnfsf9P41274 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.77□□□□□ -0.37
Tnfsf9P41274 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.77□□□□□ -0.37
Tnfsf9P41274 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfsf9P41274 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfsf9P41274 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.77□□□□□ -0.37
Tnfsf9P41274 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf9P41274 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms