Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.3□□□□□ -0.44
Sftpa1P35242 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.3□□□□□ -0.44
Sftpa1P35242 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sftpa1P35242 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm24830-201ENSMUST00000102024 166 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm11222-201ENSMUST00000119005 738 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm13316-201ENSMUST00000140537 691 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm25890-201ENSMUST00000177643 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm22614-201ENSMUST00000178300 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm18584-201ENSMUST00000203098 964 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm5781-201ENSMUST00000219792 443 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm22042-201ENSMUST00000082989 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm26232-201ENSMUST00000083360 166 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm24136-201ENSMUST00000083374 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Gm26110-201ENSMUST00000083971 165 ntBASIC12.29□□□□□ -0.44
Sftpa1P35242 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sftpa1P35242 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sftpa1P35242 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm14017-201ENSMUST00000121934 386 ntBASIC12.28□□□□□ -0.44
Sftpa1P35242 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm24548-201ENSMUST00000158650 108 ntBASIC12.28□□□□□ -0.44
Sftpa1P35242 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm8738-201ENSMUST00000172606 329 ntBASIC12.28□□□□□ -0.44
Sftpa1P35242 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm30285-201ENSMUST00000214614 422 ntBASIC12.28□□□□□ -0.44
Sftpa1P35242 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Sftpa1P35242 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sftpa1P35242 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms