Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.11□□□□□ -0.47
VtnP29788 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VtnP29788 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.11□□□□□ -0.47
VtnP29788 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
VtnP29788 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.11□□□□□ -0.47
VtnP29788 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
VtnP29788 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.11□□□□□ -0.47
VtnP29788 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VtnP29788 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.1□□□□□ -0.47
VtnP29788 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
VtnP29788 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Gm15371-201ENSMUST00000117057 784 ntBASIC12.1□□□□□ -0.47
VtnP29788 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.1□□□□□ -0.47
VtnP29788 Gm6244-201ENSMUST00000178732 841 ntBASIC12.1□□□□□ -0.47
VtnP29788 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VtnP29788 Gm2495-201ENSMUST00000191160 466 ntBASIC12.1□□□□□ -0.47
VtnP29788 Gm38144-201ENSMUST00000192790 465 ntBASIC12.1□□□□□ -0.47
VtnP29788 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VtnP29788 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.1□□□□□ -0.47
VtnP29788 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VtnP29788 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.1□□□□□ -0.47
VtnP29788 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.1□□□□□ -0.47
VtnP29788 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VtnP29788 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VtnP29788 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.1□□□□□ -0.47
VtnP29788 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VtnP29788 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.09□□□□□ -0.47
VtnP29788 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.09□□□□□ -0.47
VtnP29788 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.09□□□□□ -0.47
VtnP29788 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.09□□□□□ -0.47
VtnP29788 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VtnP29788 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.09□□□□□ -0.47
VtnP29788 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VtnP29788 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.09□□□□□ -0.47
VtnP29788 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.09□□□□□ -0.47
VtnP29788 Gm15429-201ENSMUST00000151268 798 ntBASIC12.09□□□□□ -0.47
VtnP29788 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms