Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nedd8P29595 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Mir874-201ENSMUST00000104769 76 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Gm15678-201ENSMUST00000117573 960 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Gm13597-201ENSMUST00000121239 375 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.3□□□□□ -0.44
Nedd8P29595 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Nedd8P29595 Gm27300-201ENSMUST00000184085 97 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Gm27335-201ENSMUST00000184758 97 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Nedd8P29595 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.3□□□□□ -0.44
Nedd8P29595 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.3□□□□□ -0.44
Nedd8P29595 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nedd8P29595 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.3□□□□□ -0.44
Nedd8P29595 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.29□□□□□ -0.44
Nedd8P29595 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Gm7230-201ENSMUST00000173026 815 ntBASIC12.29□□□□□ -0.44
Nedd8P29595 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.29□□□□□ -0.44
Nedd8P29595 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.29□□□□□ -0.44
Nedd8P29595 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nedd8P29595 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.29□□□□□ -0.44
Nedd8P29595 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nedd8P29595 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.28□□□□□ -0.44
Nedd8P29595 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.28□□□□□ -0.44
Nedd8P29595 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms