Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm44719-201ENSMUST00000206404 149 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm18624-201ENSMUST00000220966 658 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.34□□□□□ -0.43
Cd40lgP27548 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.34□□□□□ -0.43
Cd40lgP27548 Gm14928-201ENSMUST00000120198 477 ntBASIC12.34□□□□□ -0.43
Cd40lgP27548 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Gm6745-201ENSMUST00000199216 526 ntBASIC12.34□□□□□ -0.43
Cd40lgP27548 Gm18307-201ENSMUST00000206864 949 ntBASIC12.34□□□□□ -0.43
Cd40lgP27548 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cd40lgP27548 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.34□□□□□ -0.43
Cd40lgP27548 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cd40lgP27548 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cd40lgP27548 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm15240-201ENSMUST00000118156 720 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm23984-201ENSMUST00000157139 203 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
Cd40lgP27548 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm2445-201ENSMUST00000182798 989 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm9794-201ENSMUST00000202370 423 ntBASIC12.33□□□□□ -0.44
Cd40lgP27548 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cd40lgP27548 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cd40lgP27548 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms