Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.37□□□□□ -0.43
Tnfrsf1bP25119 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Gm9002-201ENSMUST00000178437 499 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf1bP25119 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm38671-201ENSMUST00000200573 130 ntBASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Itm2b-204ENSMUST00000228637 783 ntBASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf1bP25119 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms