Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.26■□□□□ 0.19
Mmp8O70138 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.26■□□□□ 0.19
Mmp8O70138 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Mmp8O70138 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp8O70138 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.26■□□□□ 0.19
Mmp8O70138 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp8O70138 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.25■□□□□ 0.19
Mmp8O70138 Gm18041-201ENSMUST00000218210 618 ntBASIC16.25■□□□□ 0.19
Mmp8O70138 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp8O70138 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.25■□□□□ 0.19
Mmp8O70138 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Mmp8O70138 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Mmp8O70138 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp8O70138 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.24■□□□□ 0.19
Mmp8O70138 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Mmp8O70138 Gm16202-201ENSMUST00000117532 544 ntBASIC16.24■□□□□ 0.19
Mmp8O70138 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.24■□□□□ 0.19
Mmp8O70138 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp8O70138 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp8O70138 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp8O70138 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp8O70138 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.23■□□□□ 0.19
Mmp8O70138 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Mmp8O70138 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp8O70138 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.23■□□□□ 0.19
Mmp8O70138 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Mmp8O70138 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp8O70138 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Gm5745-201ENSMUST00000183748 313 ntBASIC16.23■□□□□ 0.19
Mmp8O70138 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp8O70138 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms