Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Gm15240-201ENSMUST00000118156 720 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.41□□□□□ -0.42
BckdkO55028 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
BckdkO55028 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.41□□□□□ -0.42
BckdkO55028 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.41□□□□□ -0.42
BckdkO55028 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
BckdkO55028 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.41□□□□□ -0.42
BckdkO55028 Gm28911-201ENSMUST00000188837 117 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.41□□□□□ -0.42
BckdkO55028 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.41□□□□□ -0.42
BckdkO55028 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
BckdkO55028 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
BckdkO55028 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.4□□□□□ -0.42
BckdkO55028 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.4□□□□□ -0.42
BckdkO55028 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Gm24420-201ENSMUST00000176676 59 ntBASIC12.4□□□□□ -0.42
BckdkO55028 Gm8602-201ENSMUST00000184045 607 ntBASIC12.4□□□□□ -0.42
BckdkO55028 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.4□□□□□ -0.42
BckdkO55028 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.4□□□□□ -0.42
BckdkO55028 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.4□□□□□ -0.42
BckdkO55028 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
BckdkO55028 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
BckdkO55028 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
BckdkO55028 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BckdkO55028 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
BckdkO55028 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
BckdkO55028 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
BckdkO55028 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
BckdkO55028 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
BckdkO55028 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Gm15824-201ENSMUST00000119516 955 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.39□□□□□ -0.43
BckdkO55028 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Gm13385-201ENSMUST00000121089 220 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BckdkO55028 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.39□□□□□ -0.43
BckdkO55028 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BckdkO55028 Gm27772-201ENSMUST00000184900 187 ntBASIC12.39□□□□□ -0.43
BckdkO55028 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms