Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.59□□□□□ -0.23
Banf1O54962 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.59□□□□□ -0.23
Banf1O54962 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Banf1O54962 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Banf1O54962 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Banf1O54962 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Banf1O54962 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Banf1O54962 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Banf1O54962 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.58□□□□□ -0.24
Banf1O54962 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.58□□□□□ -0.24
Banf1O54962 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.58□□□□□ -0.24
Banf1O54962 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Gm37935-201ENSMUST00000192012 982 ntBASIC13.58□□□□□ -0.24
Banf1O54962 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Gm18905-201ENSMUST00000205454 928 ntBASIC13.58□□□□□ -0.24
Banf1O54962 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.58□□□□□ -0.24
Banf1O54962 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Banf1O54962 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.58□□□□□ -0.24
Banf1O54962 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Banf1O54962 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.58□□□□□ -0.24
Banf1O54962 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Banf1O54962 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.57□□□□□ -0.24
Banf1O54962 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.57□□□□□ -0.24
Banf1O54962 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm12403-201ENSMUST00000121384 959 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.57□□□□□ -0.24
Banf1O54962 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.57□□□□□ -0.24
Banf1O54962 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.57□□□□□ -0.24
Banf1O54962 Gm17795-201ENSMUST00000214505 757 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.57□□□□□ -0.24
Banf1O54962 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.57□□□□□ -0.24
Banf1O54962 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Banf1O54962 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Banf1O54962 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Banf1O54962 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Banf1O54962 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Banf1O54962 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Banf1O54962 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.56□□□□□ -0.24
Banf1O54962 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Banf1O54962 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Banf1O54962 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Banf1O54962 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms