Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.9■□□□□ 0.14
Smarce1O54941 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
Smarce1O54941 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smarce1O54941 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Smarce1O54941 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smarce1O54941 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.89■□□□□ 0.13
Smarce1O54941 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.89■□□□□ 0.13
Smarce1O54941 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.89■□□□□ 0.13
Smarce1O54941 Gm17837-201ENSMUST00000186435 985 ntBASIC15.89■□□□□ 0.13
Smarce1O54941 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.89■□□□□ 0.13
Smarce1O54941 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.89■□□□□ 0.13
Smarce1O54941 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarce1O54941 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Smarce1O54941 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Smarce1O54941 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
Smarce1O54941 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.88■□□□□ 0.13
Smarce1O54941 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarce1O54941 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm17795-201ENSMUST00000214505 757 ntBASIC15.88■□□□□ 0.13
Smarce1O54941 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.88■□□□□ 0.13
Smarce1O54941 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.88■□□□□ 0.13
Smarce1O54941 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smarce1O54941 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarce1O54941 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.87■□□□□ 0.13
Smarce1O54941 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Smarce1O54941 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.87■□□□□ 0.13
Smarce1O54941 Gm4875-201ENSMUST00000118257 786 ntBASIC15.87■□□□□ 0.13
Smarce1O54941 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Smarce1O54941 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Smarce1O54941 Gm38294-201ENSMUST00000192831 381 ntBASIC15.87■□□□□ 0.13
Smarce1O54941 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Smarce1O54941 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Smarce1O54941 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Smarce1O54941 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarce1O54941 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms