Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc1a6O35544 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Slc1a6O35544 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Slc1a6O35544 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc1a6O35544 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Slc1a6O35544 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.16□□□□□ -0.3
Slc1a6O35544 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc1a6O35544 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.16□□□□□ -0.3
Slc1a6O35544 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc1a6O35544 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Slc1a6O35544 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.15□□□□□ -0.3
Slc1a6O35544 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.15□□□□□ -0.3
Slc1a6O35544 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc1a6O35544 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.15□□□□□ -0.31
Slc1a6O35544 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Slc1a6O35544 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Slc1a6O35544 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
Slc1a6O35544 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm15693-201ENSMUST00000120470 637 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm27533-201ENSMUST00000183800 152 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm5264-201ENSMUST00000190584 848 ntBASIC13.14□□□□□ -0.31
Slc1a6O35544 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.14□□□□□ -0.31
Slc1a6O35544 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Slc1a6O35544 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Slc1a6O35544 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc1a6O35544 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc1a6O35544 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc1a6O35544 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Slc1a6O35544 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Slc1a6O35544 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Slc1a6O35544 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms