Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
OtpO09113 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
OtpO09113 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.91□□□□□ -0.5
OtpO09113 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.91□□□□□ -0.5
OtpO09113 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.91□□□□□ -0.5
OtpO09113 Gm18905-201ENSMUST00000205454 928 ntBASIC11.91□□□□□ -0.5
OtpO09113 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.91□□□□□ -0.5
OtpO09113 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.91□□□□□ -0.5
OtpO09113 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
OtpO09113 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
OtpO09113 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.91□□□□□ -0.5
OtpO09113 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
OtpO09113 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
OtpO09113 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.9□□□□□ -0.5
OtpO09113 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.9□□□□□ -0.5
OtpO09113 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
OtpO09113 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.9□□□□□ -0.5
OtpO09113 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
OtpO09113 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.9□□□□□ -0.5
OtpO09113 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.9□□□□□ -0.5
OtpO09113 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.9□□□□□ -0.5
OtpO09113 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
OtpO09113 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
OtpO09113 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
OtpO09113 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.9□□□□□ -0.51
OtpO09113 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
OtpO09113 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
OtpO09113 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
OtpO09113 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
OtpO09113 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.89□□□□□ -0.51
OtpO09113 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
OtpO09113 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
OtpO09113 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.89□□□□□ -0.51
OtpO09113 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.89□□□□□ -0.51
OtpO09113 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
OtpO09113 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
OtpO09113 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
OtpO09113 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.89□□□□□ -0.51
OtpO09113 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms