Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sh2b3O09039 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sh2b3O09039 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh2b3O09039 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.9□□□□□ -0.5
Sh2b3O09039 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.9□□□□□ -0.5
Sh2b3O09039 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.9□□□□□ -0.5
Sh2b3O09039 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.9□□□□□ -0.5
Sh2b3O09039 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2b3O09039 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.9□□□□□ -0.51
Sh2b3O09039 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2b3O09039 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2b3O09039 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2b3O09039 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.9□□□□□ -0.51
Sh2b3O09039 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.89□□□□□ -0.51
Sh2b3O09039 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.89□□□□□ -0.51
Sh2b3O09039 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm2495-201ENSMUST00000191160 466 ntBASIC11.89□□□□□ -0.51
Sh2b3O09039 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sh2b3O09039 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2b3O09039 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sh2b3O09039 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Grk6-205ENSMUST00000224653 2976 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm15371-201ENSMUST00000117057 784 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm11814-201ENSMUST00000119515 929 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm7287-201ENSMUST00000205267 602 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.88□□□□□ -0.51
Sh2b3O09039 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms