Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm11941-201ENSMUST00000119904 610 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm7666-201ENSMUST00000146631 819 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm16296-201ENSMUST00000159905 325 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm21027-201ENSMUST00000219300 1236 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 AC166344.1-202ENSMUST00000224139 234 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BC005561E9Q5E2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm12029-201ENSMUST00000120073 832 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm15432-201ENSMUST00000121106 195 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm5466-201ENSMUST00000119395 1890 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Mir680-2-201ENSMUST00000102163 110 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm23251-201ENSMUST00000103773 110 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm11675-201ENSMUST00000121873 832 ntBASIC20■□□□□ 0.79
BC005561E9Q5E2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC20■□□□□ 0.79
BC005561E9Q5E2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC20■□□□□ 0.79
BC005561E9Q5E2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Gm14058-201ENSMUST00000116082 735 ntBASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 AC163667.3-201ENSMUST00000225774 222 ntBASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BC005561E9Q5E2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BC005561E9Q5E2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms