Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Gm8365-201ENSMUST00000197334 648 ntBASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scaf11E9PZM7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Gm12058-201ENSMUST00000118614 437 ntBASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC18.31■□□□□ 0.52
Scaf11E9PZM7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Gm3287-205ENSMUST00000228893 1332 ntBASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Scaf11E9PZM7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Gm11675-201ENSMUST00000121873 832 ntBASIC18.3■□□□□ 0.52
Scaf11E9PZM7 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Gm5369-201ENSMUST00000217499 588 ntBASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scaf11E9PZM7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scaf11E9PZM7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scaf11E9PZM7 Gm13492-201ENSMUST00000119772 665 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms