Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.99□□□□□ -0.01
AmfrQ9R049 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
AmfrQ9R049 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AmfrQ9R049 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
AmfrQ9R049 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Gm18018-201ENSMUST00000198273 408 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 Gm6180-201ENSMUST00000065243 498 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.98□□□□□ -0.01
AmfrQ9R049 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
AmfrQ9R049 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
AmfrQ9R049 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.97□□□□□ -0.01
AmfrQ9R049 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
AmfrQ9R049 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
AmfrQ9R049 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.97□□□□□ -0.01
AmfrQ9R049 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
AmfrQ9R049 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.97□□□□□ -0.01
AmfrQ9R049 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.97□□□□□ -0.01
AmfrQ9R049 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
AmfrQ9R049 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.97□□□□□ -0.01
AmfrQ9R049 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.97□□□□□ -0.01
AmfrQ9R049 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
AmfrQ9R049 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.96□□□□□ -0.01
AmfrQ9R049 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.96□□□□□ -0.01
AmfrQ9R049 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.96□□□□□ -0.01
AmfrQ9R049 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.96□□□□□ -0.01
AmfrQ9R049 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
AmfrQ9R049 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
AmfrQ9R049 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
AmfrQ9R049 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms