Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm37714-201ENSMUST00000194742 342 ntBASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tubb3Q9ERD7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tubb3Q9ERD7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Gm9908-201ENSMUST00000211534 448 ntBASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms