Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmgn3Q9DCB1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm17968-201ENSMUST00000194902 784 ntBASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgn3Q9DCB1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgn3Q9DCB1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm29310-201ENSMUST00000185468 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21825-201ENSMUST00000185728 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm29109-201ENSMUST00000185895 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21896-201ENSMUST00000186520 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21873-201ENSMUST00000186728 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21794-201ENSMUST00000187056 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21880-201ENSMUST00000187275 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21826-201ENSMUST00000187451 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21198-201ENSMUST00000188393 696 ntBASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgn3Q9DCB1 Gm21749-201ENSMUST00000189343 696 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms