Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm12585-201ENSMUST00000117307 290 ntBASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm7774-201ENSMUST00000200064 533 ntBASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chmp5Q9D7S9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Gm5425-201ENSMUST00000214125 459 ntBASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp5Q9D7S9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp5Q9D7S9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp5Q9D7S9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp5Q9D7S9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp5Q9D7S9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Mir449b-201ENSMUST00000104833 80 ntBASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp5Q9D7S9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp5Q9D7S9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms