Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ssu72Q9CY97 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.27□□□□□ -0.28
Ssu72Q9CY97 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssu72Q9CY97 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm11779-201ENSMUST00000118541 368 ntBASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm15467-201ENSMUST00000120582 445 ntBASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssu72Q9CY97 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssu72Q9CY97 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssu72Q9CY97 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssu72Q9CY97 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssu72Q9CY97 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssu72Q9CY97 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms