Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.86□□□□□ -0.67
RTRAFQ9CQE8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm7153-201ENSMUST00000117092 455 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RTRAFQ9CQE8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.84□□□□□ -0.67
RTRAFQ9CQE8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms