Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gm28630-201ENSMUST00000187806 498 ntBASIC13.13□□□□□ -0.31
Trim8Q99PJ2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Shd-206ENSMUST00000225145 998 ntBASIC13.13□□□□□ -0.31
Trim8Q99PJ2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim8Q99PJ2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Gm21470-201ENSMUST00000187680 696 ntBASIC13.12□□□□□ -0.31
Trim8Q99PJ2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim8Q99PJ2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gm6415-201ENSMUST00000118488 348 ntBASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim8Q99PJ2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms