Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp11Q99K46 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.12□□□□□ -0.15
Usp11Q99K46 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp11Q99K46 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.11□□□□□ -0.15
Usp11Q99K46 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.11□□□□□ -0.15
Usp11Q99K46 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp11Q99K46 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp11Q99K46 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm22189-201ENSMUST00000103822 86 ntBASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm29741-201ENSMUST00000192667 421 ntBASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm44855-201ENSMUST00000205725 362 ntBASIC14.1□□□□□ -0.15
Usp11Q99K46 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp11Q99K46 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp11Q99K46 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp11Q99K46 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Usp11Q99K46 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp11Q99K46 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm5866-201ENSMUST00000177881 973 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm18041-201ENSMUST00000218210 618 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm9797-201ENSMUST00000052902 613 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Gm2423-201ENSMUST00000074863 733 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Mir497b-201ENSMUST00000093601 125 ntBASIC14.09□□□□□ -0.15
Usp11Q99K46 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms